Selected Publications

2021
  • Azad, U.P., Mahapatra, S., Divya, Srivastava, A., Shetti, N.P and Chandra, P.* (2021). Electrochemical Biosensors for Monitoring of Bioorganic and Inorganic Chemical Pollutants in Biological and Environmental Matrices. Microbial Biodegradation and Bioremediation, Imprint: Elsevier, USA, 2021. (In Press) (# Invited article)International Journal
  • Bhorkar, I. and Dhoble, A.S. (2021). Advances in the synthesis and application of self-assembling biomaterials. Progress in Biophysics & Molecular Biology. (In Press)  
  • Borkotoky, S., Banerjee, M., Modi, G. P., and Dubey, V. K. (2021) Identification of high affinity and low molecular alternatives of boceprevir against SARS-CoV-2 main protease: A virtual screening approach. Chemical Physics Letters, 770, 138446.
  • Das P., Rani J., Rawat S., Kumar S. (2021) Microalgal co-cultivation for biofuel production and bioremediation: Current status and benefits. BioEnergy Research. https://doi.org/10.1007/s12155-021-10254-8
  • Divya, Mahapatra, S., Srivastava, V.R. and Chandra, P*. (2021) Nanobioengineered Sensing Technologies Based on Cellulose Matrices for Detection of Small Molecules, Macromolecules, and Cells. Biosensors, 11 (6), 168 (Invited).
  • Kundu, D. and Dubey, V.K.* (2021) Potential alternatives to current cholinesterase inhibitors: An in silico drug repurposing approach. Drug Development and Industrial Pharmacy;  https://doi.org/10.1080/03639045.2021.1952216
  • Kundu, D., and Dubey, V. K. (2021) Purines and Pyrimidines: Metabolism, Function and Potential as Therapeutic Options in Neurodegenerative Diseases. Current Protein and Peptide Science, 22(2), 170–189.
  • Mashraqi, M. M., Chaturvedi, N., Alam, Q., Alshamrani, S., Bahnass, M. M., Ahmad, K., Alqosaibi, A. I., Alnamshan, M. M., Ahmad, S. S., Beg, M. M., Mishra, A., Shaikh, S., and Rizvi, S. M. (2021) Biocomputational Prediction Approach Targeting FimH by Natural SGLT2 Inhibitors: A Possible Way to Overcome the Uropathogenic Effect of SGLT2 Inhibitor Drugs. Molecules, 26(3), 582.
  • Optimization and evaluation of ciprofloxacin-loaded collagen/chitosan scaffolds for skin tissue engineering. 3 Biotech, 11(4).
  • Pandey, D. K., Kaur, P., Kumar, V., Banik, R. M., Malik, T., and Dey, A. (2021) Screening the elite chemotypes of Gloriosa superba L. in India for the production of anticancer colchicine: simultaneous microwave-assisted extraction and HPTLC studies. BMC Plant Biology, 21(1).
  • Prerna, K., and Dubey, V. K. (2021) Repurposing of FDA-approved drugs as autophagy inhibitors in tumor cells. Journal of Biomolecular Structure and Dynamics, 1–12.
  • Rai, H., Barik, A., Singh, Y. P., Suresh, A., Singh, L., Singh, G., Nayak, U. Y., Dubey, V. K., and Modi, G. (2021) Molecular docking, binding mode analysis, molecular dynamics, and prediction of ADMET/toxicity properties of selective potential antiviral agents against SARS-CoV-2 main protease: an effort toward drug repurposing to combat COVID-19. Molecular Diversity.  Feb 13;1-23
  • Selvaraj, C., Panwar, U., Dinesh, D. C., Boura, E., Singh, P., Dubey, V. K., and Singh, S. K. (2021) Microsecond MD Simulation and Multiple-Conformation Virtual Screening to Identify Potential Anti-COVID-19 Inhibitors Against SARS-CoV-2 Main Protease. Frontiers in Chemistry, 8.
  • Singh J and  Mishra V*, 2021. "Development of sustainable and ecofriendly metal ion scavenger for adsorbing Cu2+, Ni2+ and Zn2+ ions from the aqueous phase." Separation Science and Technology, 1-18
  • Singh J, and Mishra V. (2021) Development of sustainable and ecofriendly metal ion scavenger for adsorbing Cu2+, Ni2+ and Zn2+ ions from the aqueous phase. Separation Science and Technology.1-8.
  • Singh J, and Mishra V. (2021) Synthesis and characterization of activated carbon derived from Tectona grandis sawdust via green route. Environmental Progress & Sustainable Energy. 40(2):e13525.
  •  Singh V and Mishra V*  2021. Environmental Impacts of Coronavirus Disease 2019 (COVID-19). Bioresource Technology Reports. 15: 100744. https://doi.org/10.1016/j.biteb.2021.100744
  • Singh V and Mishra V*, 2021. "Exploring the effects of different combinations of predictor variables for the treatment of wastewater by microalgae and biomass production." Biochemical Engineering Journal, 108129.
  • Singh V,Singh J and Mishra V*, 2021 2021. Development of a cost-effective, recyclable and viable metal ion doped adsorbent for simultaneous adsorption and reduction of toxic Cr (VI) ions, Journal of Environmental Chemical Engineering, Doi: https://doi.org/10.1016/j.jece.2021.105124
  • Singh V,Singh J and Mishra V*, 2021. Sorption kinetics of an eco-friendly and sustainable Cr (VI) ion scavenger in a batch reactor, Journal of Environmental Chemical Engineering, Doi: https://doi.org/10.1016/j.jece.2021.105125
  • Verma M and Mishra V*, 2021. Recent trends in upgrading the performance of yeast as electrode biocatalyst in microbial fuel cells. Chemosphere, 131383
  • Vernekar, P. R., Purohit, B., Shetti, N. P., and Chandra, P. (2021) Glucose modified carbon paste sensor in the presence of cationic surfactant for mefenamic acid detection in urine and pharmaceutical samples. Microchemical Journal, 160, 105599.
  • Yadav, S., Prakash, J., Singh, O.P., Gedda, M.R., Chauhan, S.B., Sundar, S. and Dubey, V.K.* (2021) IFN-γ+ CD4+T cell- Driven prophylactic potential of recombinant LDBPK_252400 hypothetical protein of Leishmania donovani against Visceral Leishmaniasis. Cellular Immunology; doi 10.1016/j.cellimm.2020.104272

2020

  • Chandra, P. (2020) Miniaturized label-free smartphone assisted electrochemical sensing approach for personalized COVID-19 diagnosis. Sensors International, 1, 100019.
  • Chiranjivi, A. K., Prakash, J., Saha, G., Chandra, P., and Dubey, V. K. (2020) Mutational studies on Leishmania donovani dihydrolipoamide dehydrogenase (LdBPK291950.1) indicates that the enzyme may not be classical class-I pyridine nucleotide-disulfide oxidoreductase. International Journal of Biological Macromolecules, 164, 2141–2150.
  • Dhar P., Phiri J., Szilvay, G. R., Maloney T., and Laaksonen, P. (2020) Genetically Engineered Proteins based Nacre-like Nanocomposites with Superior Mechanical and Electrochemical Performance, Journal of Material Chemistry A, 8, 656-669.
  • Gaur, S.S., Dhar, P., Narendren, S., Sakurai, S., Kumar, S., Katiyar, V. (2020) Fabrication and characterization of clay nanoscrolls and stable zerovalent iron using montmorillonite. Applied Clay Science, 193.
  • Geetanjali, Rani R., Kumar S. (2021) Microbial community dynamics of microbial fuel cell in response to NiWO4/rGO nanocomposites as electrocatalyst and its correlation with electrochemical properties. Journal of Environmental and Chemical Engineering. 9(1):104668.
  • Gupta A, and Mishra V. (2020) Using Recycled Bacterial Culture Media to Demonstrate Anti-Counterfeiting Measures and Ninhydrin Tests with “Turn Off Fluorescence” to High School Students. Journal of Chemical Education. 97(12):4425-9.
  • Gupta A, and Mishra V. (2020) Zinc oxide nanoparticles decorated fluorescent and antibacterial glass fiber pre-filter paper. Nano Express. 1(1):010048.
  • Kumar P., Rautela A., Kesari A., Szlag D., Westrick J., Kumar S. (2020) Recent developments in the methods of quantitative analysis of microcystins. Journal of Biochemical and Molecular Toxicology. 34(12):e22582.
  • Kundu, D., Prerna, K., Chaurasia, R., Bharty, M. K., and Dubey, V. K. (2020) Advances in protein misfolding, amyloidosis and its correlation with human diseases. 3 Biotech, 10(5).
  • Kundu, D., Umesh, and Dubey, V. K. (2020) Interaction of selected biomolecules and metabolites with amyloidogenic proteins. Journal of Biomolecular Structure and Dynamics, 1–10.
  • Mahapatra, S., and Chandra, P. (2020) Clinically practiced and commercially viable nanobio engineered analytical methods for COVID-19 diagnosis. Biosensors and Bioelectronics, 165, 112361.
  • Mahato, K., Purohit, B., Kumar, A. and Chandra, P.* (2020). Clinically comparable impedimetric immunosensor for serum alkaline phosphatase detection based on electrochemically engineered Au-nano-Dendroids and graphene oxide nanocomposite Biosensors and Bioelectronics 148, 111815,.
  • Mishra, A., Kaur, U., and Singh, A. (2020) Fisetin 8-C-glucoside as entry inhibitor in SARS CoV-2 infection: molecular modelling study. Journal of Biomolecular Structure and Dynamics, 1–10.
  • Mishra, R., Joshi, V., Upadhyay, A., Amanullah, A., Dubey, A. R., Singh, S., Dubey, V. K., Poluri, K. M., Jana, N. R., and Mishra, A. (2021) LRSAM1 E3 ubiquitin ligase promotes proteasomal clearance of E6-AP protein. Cellular Signalling, 77, 109836.
  • Pandey A, Kumar S, Srivastava S. (2020) Algal Biomass Harvesting for Biofuel Production. In Algal Biofuel: Sustainable Solution Eds Richa Kothari, VV Pathak, and VV Tyagi. TERI Publication (TERI Press), New Delhi India ISBN 978-93-8653-094-3
  • Pandey A., Srivastava S., and Kumar S. (2020) Development and cost-benefit analysis of a novel process for biofuel production from microalgae using pre-treated high strength fresh cheese whey wastewater. Environmental Science and Pollution Research. 27:23963–23980.
  • Purohit, B., Vernekar, P. R., Shetti, N. P., and Chandra, P. (2020) Biosensor nanoengineering: Design, operation, and implementation for biomolecular analysis. Sensors International, 1, 100040.
  • Raj, S., Sasidharan, S., Balaji, S. N., Dubey, V. K., and Saudagar, P. (2020) Review on natural products as an alternative to contemporary anti-leishmanial therapeutics. Journal of Proteins and Proteomics, 11(2), 135–158.
  • Saha, G., Chiranjivi, A. K., Khamar, B. M., Prerna, K., Kumar, M., and Dubey, V. K. (2020) BLIMP-1 Mediated Downregulation of TAK1 and p53 Molecules Is Crucial in the Pathogenesis of Kala-Azar. Frontiers in Cellular and Infection Microbiology, 10.
  • Sasidharan, S., Selvaraj, C., Singh, S. K., Dubey, V. K., Kumar, S., Fialho, A. M., and Saudagar, P. (2020) Bacterial protein azurin and derived peptides as potential anti-SARS-CoV-2 agents: insights from molecular docking and molecular dynamics simulations. Journal of Biomolecular Structure and Dynamics, 1–16.
  • Shanbhag, M. M., Shetti, N. P., Kulkarni, R. M., and Chandra, P. (2020) Nanostructured Ba/ZnO modified electrode as a sensor material for detection of organosulfur thiosalicylic acid. Microchemical Journal, 159, 105409.
  • Shera, S. S., and Banik, R. M. (2021) Development of Tunable Silk Fibroin/Xanthan Biopolymeric Scaffold for Skin Tissue Engineering Using L929 Fibroblast Cells. Journal of Bionic Engineering, 18(1), 103–117.
  • Singh J, and Mishra V. (2020) Modeling of adsorption flux in nickel-contaminated synthetic simulated wastewater in the batch reactor. Journal of Environmental Science and Health, Part A. 55(9):1059-69.
  • Singh J, and Mishra V. (2020) Simultaneous removal of Cu2+, Ni2+ and Zn2+ ions using leftover Azadirachta indica twig ash. Bioremediation Journal. 1-24.
  • Singh V, Yadav P, and Mishra V. (2020) Recent Advances on Classification, Properties, Synthesis, and Characterization of Nanomaterials. Green Synthesis of Nanomaterials for Bioenergy Applications. 83-97.
  • Singh, A., and Mishra, A. (2020) Leucoefdin a potential inhibitor against SARS CoV-2 Mpro. Journal of Biomolecular Structure and Dynamics, 1–6.
  • Singh, A., and Mishra, A. (2020) Molecular dynamics simulation and free energy calculation studies of Coagulin L as dipeptidyl peptidase-4 inhibitor. Journal of Biomolecular Structure and Dynamics, 1–11.
  • Singh, V. and Mishra, V. (2020). Coronavirus Disease, 2019, (COVID-19): Current Situation and Therapeutic Options, Coronaviruses, 1, 1-11.
  • Tripathi, S., Singh, B. N., Divakar, S., Kumar, G., Mallick, S. P., and Srivastava, P. (2021) Design and evaluation of ciprofloxacin loaded collagen chitosan oxygenating scaffold for skin tissue engineering. Biomedical Materials, 16(2), 025021.
  • Tripathi, S., Singh, B. N., Singh, D., Kumar, G., and Srivastava, P. (2021). Yadav, S., Prakash, J., Shukla, H., Das, K. C., Tripathi, T., and Dubey, V. K. (2020)Design of a multi-epitope subunit vaccine for immune-protection against Leishmania parasite. Pathogens and Global Health, 114(8), 471–481.
  • Umesh, Kundu, D., Selvaraj, C., Singh, S. K., and Dubey, V. K. (2020). Identification of new anti-nCoV drug chemical compounds from Indian spices exploiting SARS-CoV-2 main protease as target. Journal of Biomolecular Structure and Dynamics, 1–9.
  • Umesh, Prerna, K., and Dubey, V. K. (2021) Virtual screening and repurposing of FDA-approved drugs from ZINC database to identify potential autophagy inhibitors exploiting autophagy related 4A cysteine peptidase as a target: potential as novel anti-cancer molecule. Journal of Biomolecular Structure and Dynamics, 1–17.
  • Veeresh, V., Sinha, S., Manjhi, B., Singh, B. N., Rastogi, A., and Srivastava, P. (2021)How is Biodegradable Scaffold Effective in Gap Non-union? Insights from an Experiment. Indian Journal of Orthopaedics, 55(3), 741–748.